arivis Scientific Image Analysis
SOFTWARE

ZEISS arivis Hub

new arivis hub

 

Scalable Image Analysis and Storage

Scale your image analysis and image storage to get results faster. ZEISS arivis Hub works for you. It schedules computations on appropriate hardware to maximize throughput and monitors progress. arivis Hub onboards and processes images already in storage or as they are being created by your imaging systems. Spatially resolved results are viewable directly on raw datasets.

tick-iconOptimized computing resources onsite and offsite 
tick-iconParallelization and scalability for faster results
tick-iconImport, create, organize and store datasets
tick-iconAccess and identification management
tick-iconIncreased cost efficiency

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Server or Cloud

  • Eliminate computing limitations
  • Leverage underutilized resources
  • Diverse resources onsite and offsite
  • Get results faster

Scalable Image Analysis

  • Run experiments and jobs in parallel
  • Burst through bottlenecks
  • Distribute computing resources
  • Handle huge datasets

Cost Efficiency

  • Screen compounds more rapidly
  • Image analysis to better diagnose defects
  • Instantly share information
  • Analyze thousands of images

Scale and Share your Image Analysis Pipelines

A nucleus of computational activity and collaboration at scale. ZEISS arivis Hub enables design and execution of large-scale experiments. It allows for efficient processing of vast amounts of imagery through virtual team of computational workers, optimizing and adapting usage and processing speed of server and workstation processing cores according to your needs. Researchers can create analysis pipelines in arivis Pro and upload them on to ZEISS arivis Hub to be vetted and used by others. Computing experts can use API's to parallelize and scale their own innovative processing algorithms.

 
BENEFITS

Your Computation Hub

Access from Anywhere

  • Register and browse image collections, experiments, results
  • Manage access for users and groups
  • Leverage computation onsite and offsite 
  • Import and archive original datasets 

Scalable Efficiency

  • Analyze images in the integrated arivis platform
  • Run tailored pipelines at scale
  • Flexible pricing model for throughput bursts
  • Increase efficiency with scalable computation

Imaging Science Workflow

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Acquire Images

Scientific images come in different dimensions (2D or 3D), timings (still or time-lapse), channels, and regions of interest (continuous tiles or disconnected views). It's crucial to securely store and access all types of images, regardless of their size, for imaging science workflows. arivis products can monitor image acquisition and onboard images as they are created. Custom structuring is available using the Scalable Image Storage (SIS) format.

Products: arivis Pro, arivis Hub, SIS Coverter

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Visualize

Images and results must be inspected at various steps in imaging workflows to ensure accuracy. Quality checks after acquisition and processing guarantee correct raw data for precise analysis. Direct interactive visualization of results on raw images offers instant pattern detection in the data. arivis products provides quick visual access to support quality checks and result discovery. Scalable Image Storage (SIS) files are always viewable, even during processing.

Products: arivis Pro, arivis Hub, arivis Pro VR

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Process and Enhance

A host of algorithms improve and standardize image background and noise characteristics or stitch 3D regions of interest. New AI-based reconstruction algorithms enhance images significantly. arivis products allows quick evaluation of a multitude of strategies for optimized image enhancement. Processing is highly parallel, fast and efficient.


Products: arivis Pro, arivis Hub

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Extract Results

Producing spatially resolved objects on scientific images yields discoveries and conclusions. Different approaches create results objects for volumes, over time, collections or classes. arivis products allow you to leverage the best approach for your objects’ data and databases, which can contain useful computed features, for each image. Relevant objective measurements tell each image's story and can be viewed on raw or enhanced images.

Products: arivis Pro. arivis Hub, arivis Pro VR

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Summarize

High quality images and result sets must be distilled to provide snapshots of project progress and outcomes. Summarizing results in the viewing framework before exporting can save time and enable efficient feedback loops. Flexible charting in arivis products affords custom measurements’ summaries. High-resolution rendering provide information-rich views of each image or time-series. Results (tables, surfaces, renderings) are easily exported.

Products: arivis Pro, arivis Hub

 

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Enable Meta Analysis

In high throughput and enterprise-level imaging science, disconnected results from a huge number of experiments often hinder metanalyses. ZEISS arivis Hub can be configured to expose spatially resolved and summary data, as well as raw data result objects, to metanalysis algorithms including AI.



Products: arivis Hub

Architecture

ZEISS arivis Hub enables faster image processing through parallel computation. Imaging experts can utilize the latest strategies and connect datasets to computing servers on or offsite for faster results. 

Imaging systems - fluorescence, CT, EM, high-content, MRI, and histology digitize experiments. Images are a heavy data burden but can contain incredible information you do not want to miss. arivis applications convert images into Scalable Image Storage (SIS) for easy access. No need to transfer the entire dataset to examine your results. SIS allows access to any part of any dataset, at any time for visualization or computation.

Datasets - Scientific images are stored on computers, workstations, and servers throughout your organization. The machines often lack power for rapid processing of heavy image data. We enable efficient file access for data inspection and computational pipeline design. The Hub allows registration of datasets from anywhere, eliminating bottlenecks and data silos.

Experts - Scientists have image information extraction ideas, but they need special staff to connect datasets to computation servers and run jobs. ZEISS arivis Hub simplifies job submission and lets you add computation capacity as needed, onsite or in the cloud.

Processing Servers - Maximize server usage with ZEISS arivis Hub. Campus computing power may not be used to the fullest, leading to wasted space, energy consumption, and depreciation. Furthermore, the information remains hidden in the images. Offsite resources can be leased for temporary bursts of capacity.

ZEISS arivis Hub optimizes computational resources by pooling processors and intelligently distributing tasks to maximize efficiency and throughput.

scale up your image analysis with ZEISS arivis Hub

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Scalability and Stability Based on Reliable Cloud Solution

  • Easy access of additional PC power
  • On premise server
  • Cloud / Web
  • Any data size
  • Multi-dimensional data 2D, 3D, 4D,
  • Well plates
  • Experiments
  • Tiles

Small Scale Analysis on a Single Desktop for Single User

  • Segmentation via flexible Analysis Pipeline
  • Workflows for spheroids and organoids
  • Workflows to count, measure and track
  • Manual proofreading, semi-automatic analysis
  • Interactive work on statistics and 3D result representation

Large Scale Batch Analysis for Institutes and Core Facilities

  • Central image storage
  • Customized pipelines for specific tasks
  • Labelled cells counting
  • Total cell volume Measurement
  • In 3D cell tracking
  • Intensity measurement over time
  • Automated pipeline for segmentation
  • Batch processing without moving data

Computing Infrastructure

ZEISS arivis Hub is a highly scalable solution for various data storage and processing needs. From a single department to campus-wide deployment to multiple locations in industry.

Small to mid-sized businesses that require out-of-the-box solutions, which are cost-efficient and easy to manage will also find an answer to their needs with arivis. 

For this reason, arivis recommends the HIVE® modular server platform by ACQUIFERTM for ZEISS arivis Hub deployment.

HIVE is designed for biology-focused scientists and boosts productivity in microscopy facilities and screening labs.

HIVE is a high-speed centralized data repository. It removed the need to move or copy datasets.

Its modular design integrates various features, such as processing speed, visualization, remote access, project management, flexibility, data security, scalability, and ease of use.

HIVE saves time, space, costs, and administrator workload.

Customers and Partners

Leading institutes and research organizations trust ZEISS arivis for scientific image analysis.

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Our Team is Happy to Help You

arivis experts are happy to learn what your scalable image analysis and storage needs are.